This FAQ was prepared by the STScI FOS team and appeared on the STScI FOS web pages. It is reproduced here with the permission of STScI.

FOS Frequently Asked Questions (FAQ)


List of common questions received by FOS Instrument Scientists mostly from the post-COSTAR era concerning both post-observation data analysis and principles involved in the structuring of an observing sequence that can affect analysis procedures. (last updated: 19 January 1998)

The questions are grouped into the following 12 sections:

1. Target acquisition
  a) different acquisition modes 
  b) pointing accuracy

2. Side switching

3. Aperture throughputs, flux calibration and accuracy
  a) aperture throughputs
  b) flux calibration and accuracy

4. Aperture wheel, aperture location and orientation

5. Wavelength calibration and accuracy

6. Polarimetry

7. Re-calibration of spectra
  a) CALFOS
  b) other IRAF/STSDAS software

8. Observations with paired apertures

9. Scattered light

10. Rejection limit (RE]LIM)

11. Exposure times

12. Miscellany
   -  currently includes Y-bases, dead diodes, and Modified Julian Dates. 

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1. Target acquisition using the binary search (ACQ/BIN) option.

l.a) different acquisition modes

Q: How do I tell what type of acquisition was performed?
A: Check the OPMODE keyword in your .shh header.

Q: How do I interpret the acquisition image?
A: The FOS paper products provide useful diagnostics of acquisition 
inages, dwell scans, and exposure sequences.  Please refer to Chapter 30 
of version 3 of the HST Data Handbook for a thorough discussion of 
the interpretation of FOS acquisitions.

Q: What are the limitations of the binary acquisition technique?
A: Binary acquisition is recommended for targets that are point-like
(in the wavelength range covered by the detector being used), not
highly variable ( < +/- 1.0 mag) with reasonably well known spectral
energy distributions, and not brighter than the MIRROR limits. Active
galaxies with nuclear regions dominated by the galaxy starlight cannot
use ACQ/BIN; these observations require ACQ/PEAK. Crowded fields or
regions with many knots as in Seyfert galaxies can use ACQ/BIN to
acquire the brightest target ONLY IF no more than 5 knots/stars are
brighter than the faint limit of the acquisition. ACQ/BIN can also be
used to acquire the nth brightest object in a field, but this is a
seldom used mode .

Q: Can the gratings be used during binary acquisition and what are the 
brightness limits?
A: The binary target acquisition uses ONLY the MIRROR, gratings cannot
be used.  The brightness limits for the MIRROR and hence for a binary
acquisition are given in Tables 1.11 and 1.12. of the FOS Instrument
Handbook version 6.

Q: What is the wavelength range and sensitivity of the FOS when using 
the MIRROR?
A: The passband of the MIRRORs is effectively the same as for the
detectors. Hence, for the BLUE detector the wavelength coverage will
be from 1150-5500A, and the RED detector coverage will be from 1500 -
8000A. As a working procedure, assume that the efficiency of the
mirrors is ~nearly wavelength independent, such that Fig. 1-1 of the
version 6 FOS Instrument Handbook approximates the effective
sensitivity of the FOS when using the MIRRORs.  Roughly, the pivot
wavelength for flat spectra is ~2430A, Blueside, and ~3240A, Redside.


Q: How accurately should we know the spectral energy distribution of 
our target?
A: Since binary acquisition expects the brightness of the target to be
within a given range of counts, the success of the acquisition depends
on how accurately one can predict the counts. Thus, knowledge of the
spectral distribution over the wavelength range of the MIRROR is
necessary. For example, for quasars Fn ~ n-1 is a reasonable
approximation. If the spectral distribution is unknown or if there is
an uncertainty of more than 1 magnitude in target brightness, then
ACQ/BIN is not recommended.

Q: What is the overhead time required if an offset target acquisition
is used?
A: The time required for physical movement of the telescope from the
offset star to the target is very small. Therefore, only the overheads
associated with the acquisition mode being used need be included in
orbit-packing calculations.

Q: Do I need to do a peak-up after slewing to the target?
A: You must add in quadrature the pointing uncertainty of your offset
slew and the uncertainty of your target acquisition method. If the
observation is in the 4.3" or the 1.0" aperture and the accuracy of
the acquisition of the offset star is 0.08" or better, then the target
typically can be acquired directly into the aperture and observations
started. There is no need for an extra ACQ/PEAK in such a
case. However, if an aperture smaller than 0.5" is being used or the
S/N of the observation has to be >30, then an ACQ/PEAK after the
offset slew is essential.  (Also, see section 1.b, Pointing Accuracy.)

Q: Do I need to put the WFPC2 early acquisitions in the observation 
summary forms?
A: Yes, the WFPC2 early acquisitions have to be given in the
observation summary forms. The early acquisitions are treated as
separate WFPC2 observations.  Requiring Guide Star selection with the
same GS Plate ID is essential!

l.b) pointing accuracy

Q: What is the pointing accuracy for ACQ/BIN?
A: The 1 sigma pointing accuracy of an ACQ/BIN is 0.08" for the BLUE
detector and 0.12 n for the RED detector. These pointing accuracies
imply that observations with the 4.3" and 1.0" that do not require
high photometric accuracy (S/N < 30) can be performed without the need
for a peakup. If a pointing accuracy better than 0.1" is required,
then a small peakup is recommended.

Q: Are offsets determined from the Guide Star Catalog (GSC)
sufficient?
A: The guide star catalog positional accuracy is approximately 0.3",
hence, GSC-determined offsets are not sufficiently accurate and an
extra ACQ/PEAK will be required after the slew. Offsets determined
from the WFPC or the WFPC2 are preferable.

Q: What is the accuracy WFPC or WFPC2 early acquisition (EARLY ACQ)
astrometry?
A: An offset slew of 1 arcmin between targets whose coordinates are
based upon WFPC early acquisition astrometry typically yields a 1
sigma pointing uncertainty of 0.08 arcsec. The accuracy of WFPC2
astrometry was not determined at the time this was written but should
be comparable.  It is vital that the same GS Plate ID be used for the
FOS and the WFPC/WFPC2 observations as coordinate frame offsets can
exist for targets located near the edges of overlapping GS plates.
Several early acq derived acquisitions failed for this reason.

Q: How do I determine the uncertainty in the pointing of the FOS?
A: In the Instrument Handbook v6, section 2, acquisition modes and
their pointing accuracies are described.  One should use these rules
and the pointing information in the 'Paper Products' provided with the
data (or generated with iraf.stsdas.hst_calib.paperprod software).

Q: How do I confirm that the pointing of an FOS observation was correct?
A: To be absolutely sure, you'd have to take an ACQ image after the
slew of the telescope (the slew is AFTER the ACQ/PEAK). If all
ACQ/PEAK images are ok, and data are good, then you may assume that
the FOS was pointed properly. There is also a very costly procedure
that uses engineering data to confirm pointing. This option is only
available if it is deemed necessary by an Instrument Scientist.


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2. Side-switching

Q: What was the overhead for a side-switch?
A: 50 minutes, which often was hidden in an occultation if the orbit was 
properly packed.

Q: Is a peak-up required after a side-switch?
A: A peak-up is required after a side switch for all observations with
aperture 0.5" or smaller OR if pointing accuracy better than 0.15" is
desired.  The peak-up strategy should be the same as the last stage of
peak-up used before the side-switch.

Q: Was 6 orbits the limit for side switches?
A: There was no limit on the number of orbits imposed directly by the
side switch process. This statement supersedes any statements in the
version 5 FOS Instrument Handbook. All FOS observations were limited by
the number of SAA-free orbits available. The number of orbits commonly
available were a typical minimum of 6 and a typical maximum of 9,
depending on the declination of the target and the time of the
year. FOS could not observe during SAA passage.

Q: When observing the same object with redside and then with blueside, 
does the telescope slew?
A: Yes. There is no change in guidestars, but the telescope must slew
the distance between the apertures, ~57". The Phase II Proposal
Instructions, figure 7.1, page 7.8, as well figure 1.3 of the
Instrument Hanbook, illustrate the aperture layout.


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3. Aperture throughputs, Extended Source Flux Calibration

3.a) Aperture throughputs

Q: How do I calculate FOS aperture throughput for extended sources?
A: Please refer to the HST Data Handbook V2, chapter 17, and ISRs
CAL/FOS-106,136 and 140. 

CALFOS calibrates the data as if the object is a point source well 
centered in the aperture.

For extended sources which overfill the aperture, the GO can redo the
calculation to get a more appropriate flux.   

For extended sources smaller than the aperture Field of View (FOV):
one needs to produce a model of the target; convolve it with an FOS
PSF (see ISR CAL/FOS-148); normalize the total counts in this image to
1; then sum the counts within the FOV of the aperture. This is then
the throughput factor to use in scaling the pipeline's flux value
after first factoring out the pipeline's point-source throughput
factor.(see the Data Handbook, ISR 106.

Q: Are FOS calibrated fluxes calculated relative to the 4.3 aperture?
Do I have to multiply the fluxes by a relative throughput to get the
correct flux for other apertures?
A: For point sources, no action by the user is necessary.  Flux
calibration observations were made with the 4.3" and 1.0.  aperture.
Wavelength dependent ratios of the throughput(also measured in
observations of stellar standards) of the other apertures wrt the 4.3
were used to produce flux calibrations for those apertures. The
pipeline's conversion from counts to flux takes into account whichever
aperture was used.

3.b) Flux calibration and accuracy

Q: Why doesn't my post-costar FOS data appear to be flux calibrated
even though the header indicates that this step was performed?
A: For post-costar FOS data before about March 29th, 1994, there were
no Inverse Sensitivity Files to use for flux calibration, so dummy
files were used in the pipeline. Hence, although the header keyword
switch was set to COMPLETE, this calibration step was not correctly
implemented. The pixels in the dummy file are all set to 1.0, so the
clh file resulting from application of this 'flux correction' is
actually still in units of corrected counts per second. If your data
is affected by the use of such a "dummy" file, the proper IVS files
can be retrieved from the archive and used to re-calibrate your data.
  Also, 0.1"-Pair and Bar aperture data receive a dummy pipeline 
flux calibration.  Recalibration using a 4.3" aperture IVS for Bar
data and the 4.3" IVS * throughput correction of 1/(~0.4-0.5) for 
0.1"-Pair data is recommended. 

Q: For the FOS 1" aperture, what is the percentage of flux measured by
the FOS if the source is centered. What about if its not centered?
A: Instrument Science report 97 provides an analysis of flux
variations due to pointing offsets from the target.  For a well-
centered source the 1" aperture throughput is ~90-95% of the 4.3"
aperture.


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4. Aperture wheel, aperture orientation, location

Q: How does one find the exact center position of the FOS aperture on 
the sky?
A: Check your Paper Products(iraf.stsdas.hst_calib.paperprod).  There
is also a cookbook for this available through help@stsci.edu.  Also
check page 15 of the FOS Instrument Handbook, version 6.0.  The
information is in the keywords RA_APER1 and DEC_APER1, however these
keywords should not be relied upon for moving targets. (If you have a
moving target--contact help@stsci.edu for assistance.)

Q: How do I find out where the aperture is pointed using an ACQ IMAGE?
A: The center pixel of an ACQ image is at the aperture center.  The
pixel centers are diode width/4 apart in X and diode height/16 apart
in Y.  The target offset from center of the ACQ IMAGE will be the
nominal offset from aperture center in any associated spectra.  There
are cookbook descriptions of ACQ IMAGE data available from
help@stsci.edu.

Q: Which way is the FOS 0.25 x 2.0 arcsec slit oriented? Is the Y-axis
the short axis, or the long axis?
A: The y-axis is the long axis, which defines the aperture angle. For
PA_APER=0, the y-axis is aligned with North, as shown:

	-----
	|   |
	|   |
	|   |    		N^
	|   | y-axis		|
	|   |		    E<--
	|   |
	|   |
	_____
	x-axis

Q: Is there more than one aperture wheel, or are the same apertures
used for both redside and blueside?
A: There is one aperture wheel, but there are two sets of apertures.
When the 4.3" aperture is positioned over the redside detector,
another, separate 4.3" aperture is positioned over the blueside
detector.  So, there are two physically different apertures, but they
are the same size and are positioned simultaneously over the red and
blue detectors.  For further information see:
  CAL/FOS ISR-131 and ISRs related to aperture sizes at 
  http://www.stsci.edu/ftp/instrument_news/FOS/fos_bib.html


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5. Wavelength calibration and accuracy

Q: What is the GIM correction?
A: It is a correction to account for variations in the earth's
magnetic field made necessary by problems with the magnetic shielding
of the FOS detectors. The deflection of the photo-electrons in the FOS
Digicon tubes can be adjusted to compensate, in both the X and Y
directions, for the Geomagnetic induced Image Motion(GIM).

Q: Was the GIM correction made on-board, or was it part of the pipeline
calibration?
A: For data acquired after April 5, 1993, the GIM correction was done
on-board.  For data prior to that date, the CALFOS software could be
used to perform a correction for the offset ONLY along the X,
wavelength dispersion axis. The Y shift is calculated and reported by
the software but no correction to the recorded number of counts can
be performed.

Q: Why do I see wavelength offsets between different FOS spectra of 
the same object?
A: The offset may be due to the non-repeatability in the positioning
of the filter-grating wheel. Please refer to ISRs CAL/FOS-49 and 60
and 145 for a description of this positioning problem.

Q: There is an unexplainable loss of signal at one end of the
spectrum. The tilt or slope of the continuum of my spectrum is odd.
A: Imperfect target centering in the aperture may combine with the
curvature of the FOS spectra (caused by imperfections in the magnetic
focusing of the photoelectrons onto the diode array) can lead to
effects such as these.  If the observed object spectrum is
significantly offset on the diode array relative to the standard star
observations used to create the sensitivity calibration, the flux
calibration may not adequately match your observation.  Please see
ISRs CAL/FOS-96 and 110.

Q: What is the dispersion of the prisms?
A: The dispersion in Angstrom/pixel is as follows:
	wavelength	 RED	  BLUE 
			detector detector
	1500		 0.24	  0.31
	3000		 6.6	  6.6
	6000		56.9	 57.7
	9000	       114.8	140.7

Q: What is the wavelength accuracy of the FOS gratings?
A: The wavelength accuracy of the FOS observations depends on the
accuracy with which the target has been acquired and the accuracy with
which the FOS Filter-Grating-Wheel (FGW) has been positioned.
Mis-centering parallel to dispersion in the aperture will produce a
wavelength zero-point offset. For precision wavelength observations,
we recommend a pointing accuracy of one quarter-stepped pixel (0.07")
or better in order to remove the acquisition-related centering
uncertainty. The FGW-related uncertainty can introduce a random offset
of up to approximately 0.3" diodes (1 diode corresponds to 250 km/see
with all FOS high-dispersion gratings). For precision wavelength
analyses an FOS WAVE exposure must be acquired immediately before or
after the science exposure with no motion of the FGW between the
exposures. Typical WAVE exposures are of the order of a few seconds so
that the proposer is charged only the standard 6 minute ACCUM
overhead.

Q: Could FOS WAVE observations be hidden in Earth occultation?
A: No, HST flight software did not allow this.

Q: What type of velocity correction is made to FOS data? What is the
maximum amount of shift to heliocentric wavelengths at 2000A?
A: There is no on-board velocity correction made to FOS data.  The FOS
is unable to resolve wavelength shifts of the order of HST's orbital
motion. The GHRS does have high enough resolution to be affected by
these velocities and its detectors are operated accordingly.  However,
if wavelength shifts of +/- 30 km/s are significant to your
measurement then the Earth's orbital motion should be removed
post-facto.

Q: Is the FOS wavelength scale converted to air wavelengths?
A: No, unlike IUE, all HST wavelengths are vacuum wavelengths.


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6. Polarimetry

Q: Would I be wasting my time to try to detect 0.5% polarization in 
the UV ?
A: See Chapter 32 of the version 3 HST Data Handbook.  The general limit
is set by your binned photon statistics and certain detailed instrumental 
effects.  NOTE:  FOS/BL G130H polarimetry was not available post-COSTAR.

Q: What are the polarimetry overhead times?
A: The overhead times, in addition to the 6 minutes of ACCUM overhead, 
were as follows:

	POLSCAN  4:  5 minutes
	POLSCAN  8:  8 minutes
	POLSCAN 16: 12 minutes

Q: Can a polarimetry observation be split over two orbits?
A: No, polarimetry observations cannot be split over multiple orbits, a
complete POLSCAN cycle has to be done in a given orbit.  Naturally,
S/N can be improved by combining POLSCAN cycles obtained in different
orbits.


Q: Does CALFOS handle multiple read polarimetry data?
A: CALFOS versions earlier that 1.3.2 do not properly handle
polarimetry data that have nread > 1. You won't get an error from
CALFOS, but the answers will be wrong.  CALFOS V.1.3.2 (and greater)
correctly handles multiple read polarimetry data.  Also, note that the
'stsdas.hst_calib.  fos.spec_polar' package can be used to analyze
polarimetry data.  **All** polarimetry data obtained via the HST
archive should be reprocessed with the current CALFOS.

A:  Version 1.3.2 properly handles this data.


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7. Spectral (re)calibration with CALFOS and other IRAF/STSDAS software tools

7.a) CALFOS

Q: How can I find out more about the uncertainties in my calibration?
A: See the Data Handbook, Chapter 15. It explains sources of
photometric error and some possible problems with data.

Q: In what order are the calibration steps performed in the pipeline?
A: See the Data Handbook, Chapter 14. It explains the calibration 
procedure in detail.

Q: How is the scattered light correction implemented in CALFOS?
A: See ISR CAL/FOS-103.

Q: Is there a list of changes made to CALFOS and dates they were
implemented?
A: Here's a summary of changes.  While running iraf and with the FOS
package loaded you should be able to cd to fos then cd to calfos and
page ycalfos.f to see a complete listing of CALFOS versions and change
notes. (pipeline implementation dates may lag the dates given there
for the software edits, however the .trl, trailer, file of a given
data set will list which CALFOS version was used to perform the
calibrations.)

	CALFOS		Changes					Delivered
	1.3.0		Fix GIM round-off error;		7-Oct-93
			check YFGIMPEN keyword before
			applying GIM corr; fix missing
			error msg; fix memory allocation
			bug in BAC_CORR

	1.3.1		Added scattered light correction;	21-Mar-94
			Fix polarimetry nread>1 bug.

	1.3.2		Added PEDIGREE checking;		19-Apr-94
			Fix background scaling for
			polarimetry nread>1 data.

	1.3.2.2		Retain negative Stokes I values		30-Aug-94
			in polarimetry routines.

	1.3.2.31	Fix bug causing uncalibrated		16-Sep-94
			polar data to crash.

	2.0		White dwarf flux scale implemented	21-Oct-94
			Proper units|in .clh file for all
			data > April 19,1994. Focus correction
			and sensitivity degradation accounted
			for. 

	2.2		updated so/that post-costar data would	16-May-95
			run properly.

	2.3.2		Scattered light algorithm updated	end-Dec-95
			adding median filter w/4sigma reject.

	2.4.1		AIS correction available for		mid-Mar-96
			pre- and post-COSTAR.




Q: What is the CCS9 file? CALFOS 'asks' for it, but it isn't listed in
my raw data header.
A: The CCS9 file is a new reference table related to the
implementation of a scattered light correction for some of the FOS
gratings . It is a new addition to CALFOS in V.1.3.2. The task,
ADDNEWKEYS can be used to update older data headers with the proper
keywords and switches before re-calibrating. For a detailed
explanation of this process please refer to CAL/FOS-103 and page 245
of the Data Handbook.  The scattered light correction will be
performed on spectra from those gratings which expose only a subset of
the diodes so that counts in the unexposed region can be used as a
measure of the scattered light.  The correction used is the mean value
in this region, after the model background is subtracted and pixels
with values 4 sigma from the median are rejected.  Any data previously
calibrated without this correction should be reprocessed.

Q: CALFOS gives me a warning that the GIM correction is not being
applied. Is this something to worry about?
A: No, since April 5th, 1993 the GIM correction is done on-board, so
it is skipped in the pipeline. The correction is still an option in
CALFOS so that data taken before the on-board GIM correction was
installed can be re-calibrated with the GIM correction.  Be carefull,
the software does not protect you from applying the correction a
second time to data that was already 'de-GIMed' on-board.

Q: How does CALFOS handle Rapid-Read mode differently than ACCUM mode?
How do I produce a final spectrum from Rapid-Read data?
A: CALFOS creates a c3h/c3d file for Rapid-Read spectra. This file is
the total flux and total propagated error for each data group of the
flux file (clh). RCOMBINE will produce an average of the fluxes from
all the readouts.

Q: When I run CALFOS on my data I get a warning that reads: " WARNING:
Fill data in object, frame 1" etc. What does this mean?
A: This may mean that you lost some data due to tape recorder tape
turnaround or somewhere else in the transmission of the data. Look for
diagnostic messages in the ocx, pdq and trl files. An example: "Due to
a tape recorder track change groups of data were lost.'' In that case,
to find out which groups you've lost use HEDIT to look at the keyword
FPKTTIME for EACH GROUP and look for time gaps.  Comments found in the
Paper Products may also help identify the cause of the FILL.
 
7.b) other IRAF/STSDAS Tasks

Q: How do I stitch spectra of different wavelengths together?
A: Although as yet unavailable at this writing, an STSDAS
task that will perform this function is in preparation and may be
available by the time you are reading this.

Q: Is there an IRAF task I can use to combine the groups of my RAPID
READ images?
A: Yes, RCOMBINE will combine groups of an image.

Q: Is there a way to combine my polarimetry images in IRAF?
A: Yes, PCOMBINE will do the job. Check the SPEC_POLAR package in IRAF
for other useful polarimetry analysis tasks.

Q: Can I combine spectra and weight it by error or variance?
A: Yes. Use the PCOMBINE task in SPEC_POLAR (in IRAF). It does not
work on multigroup images so you will have to copy the last group of
your ACCUM data to an image of its own, or use RCOMBINE to combine
your RAPID READ/groups into a single group image. You will have do
this for the c1h, c2h and cqh before you run PCOMBINE.  Also, you must
use HEDIT to update the headers of your new clh, c2h and cqh file so
that NREAD = 1.

Q: Can I convolve a spectrum by a Gaussian to match the resolution of 
a lower resolution spectrum?
A: Yes. This can be done with the IRAF task, GAUSS. You will need to
calculate your kernel size in PIXELS. There is a cookbook available
through help@stsci.edu.

Q: Do the tasks LINEFIND and DISPFITY need the positions of the 
lines in diodes or in pixels?
A: LINEFIND and DISPFITY need the positions in diodes. The
documentation on these tasks is currently poor because the tasks were
not intended for public use.  Assistance is available through
help@stsci.edu.


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8. Observations with paired apertures

Q: Can the exposure time spent on the SKY aperture be less than that 
on the OBJ aperture?
A: No, the exposure time on the SKY observation is equal to that on
the OBJ observations. It cannot be changed. The OBJ and SKY
observations cycle in alternating samples, of ~10s duration, while
building up the specified exposure time.  The proposal Logsheet
exposure time is therefore divided equally between OBJ and SKY.

Q: Will I get only the sky subtracted spectrum?
A: The calibration pipeline produces both the calibrated OBJ and SKY
spectra and stores the SKY in the c8h file. It also produces a sky
subtracted spectrum and provides it in the clh file.

Q: Can I use a paired aperture but avoid sky subtraction?
A: Yes. You must specify STEP-PATT=SINGLE as an optional parameter (in
Cycle 6 this became the default).  Then, observations will be obtained
through only the specified upper or lower of the aperture pair.

For Cycle 5 the default became the upper (or 'A') of the paired apertures.
Pre-Cycle 5 the default was the lower (nearer OTA V1 axis), B, aperture.


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9. Scattered light

Q: What is the amount of scattered light in the G130H grating?
A: The scattered light is due to the gratings down-scattering light
originating from >2500A. The amount of scattered light in the G130H
grating spectral region depends on the spectral energy distribution of
the target. Hence, very red objects like red stars and elliptical
galaxies could have their UV spectrum totally dominated by the
scattered light.

Q: I have pre-costar data. Is there a scattered light routine I can
use on my data?
A: For pre-costar data in some detector/grating combinations you can
run the task ADDNEWKEYS to update your data headers, and then run
CALFOS in STSDAS version > 2.4.1. This will perform a simple scattered
light calculation (described in CAL/FOS-103 and on page 245 of the
Data Handbook).  At the same time one should set the AIS correction
switch to PERFORM so that the white dwarf flux standard will be
applied along with the time dependent throughput and instrumental
sensitivity corrections.



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10. Rejection limit (REJLIM)

Q: Is REJLIM possible after COSTAR
A: Yes, REJLIM can be used after COSTAR.  However, it was presented as
an OPTIONAL PARAMETER only in the Engineering version of Phase II
proposal instructions, not the General Observer version.

There were extremely few FOS science observations taken with REJLIM
turned on.  Mostly, it was used in calibration and DARK measurements.
A search of the FOS team's database of HST proposals yields the
following list of proposals with possible use of REJLIM; 1050, 1053,
1316, 260, 28, 3198, 3897, 4132, 4135, 4698 and 4856.

The keyword YNOISELM in the .ulh header indicates the value of REJLIM.

YNOISELM=65535 is equivelent to REJLIM = 0 (turned off).  There is a datatype
mismatch between the true value of that keyword and the one used by
the pipeline software that populates the value entered into the
header.  ISR-76 indicates that a value of -1 had to be used in the
commanding to force the onboard software to turn REJLIM off. 
This appears consistent with the ulh value which would be the 
result of having treated a signed integer(-1) as unsigned, 
yielding 65535.


Q: How does REJLIM work?  
A: REJLIM is used with FOS ACCUM or IMAGE mode. The detector read-out
STEP-TIME is chosen such that only a specified number of counts
(typically 1) is expected to be detected, in total, in all of the
diodes, in the detector live-time for a particular STEP-TIME.  (For a
more complete discussion of the difference between LIVE-TIME and
STEP-TIME, see the FOS Data Handbook, but for simplicity's sake,
assume they are the same.) For example, with REJLIM=1, if more than 1
count is detected by the entire diode array in the specified
read-time, the on-board software assumes that the signal contains
contamination by a burst of signal from cosmic ray induced particle
background, the affected data are discarded with no backup, and data
taking continues for the remainder of the specified exposure
time. (Note: the discarded readout is NOT repeated!) If only 1 count
is detected, then it is assumed that the count must be from the source
and the data are saved. If it were expected that cosmic rays produced
stronger bursts of background counts, then a higher value of REJLIM
could be used to exclude only those STEP-times in which such bursts
were detected. Our best understanding of the nature of the background
currently suggests most background events do NOT occur in bursts, so
that REJLIM > 1 is not recommended.

----> Please note that REJLIM is an "all-or-nothing" operator on 
each detector read-time. If an imprudent choice is made for the 
read-time, a large portion or ALL of an observer's data could be 
lost! Naturally, REJLIM should be considered ONLY for observations 
of very faint sources!

See also, CAL/FOS ISR-76.

Q: How was REJLIM specified in the proposal?
A: This was specified as a parameter ONLY during the phase II part of
the proposal submission process.  However, it was presented as an
OPTIONAL PARAMETER only in the Engineering version of Phase II
proposal instructions, not the General Observer version. You MUST refer
to the RPSS or RPS2 input file to see if REJLIM was specified.  It was  
specified via the comment field.



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11. Exposure times

Q: How can I get my exposure time from the FOS data header?
A: Header Keyword EXPOSURE gives the live integration time in seconds
that went into gathering the counts in any given pixel.  Note that
this is not the same as your requested total exposure time (elapsed
time for recording the data) (unless NXSTEPS and 0VERSCAN = 1) because
only 512 pixels (diodes) are exposed at a time while building up the
typical 2064 wavelength pixels. See the FOS Instrument Handbook, v.6
pages 58-59).

Q: How do I get the Total elapsed time of an integration for an FOS 
observation?
A: Header keyword EXPTIME.
The FOS Instrument Handbook, v.6 pages 58-59, gives the following
formula for calculating total elapsed time of an integration (in
seconds)

Delta T = (LIVETIME + DEADTIME) * INTS * NXSTEPS * OVERSCAN * YSTEP *
NPAT * NREAD * 7.8125E-6

Livetime and Deadtime are in units of the on-board FOS microprocessor
clock ticks, 7.8125 microseconds apiece.

All words in capitals above are header keywords. The start time of
EACH GROUP is FPKTTIME from the header of that group.

Q: What is the difference between diodes and pixels and how does this
affect the exposure times?  
A: In normal ACCUM, RAPID, or PERIOD mode observations the spectrum is
shifted in the X (dispersion direction, parallel to the diode array)
by quarter-diode steps 20 times (NXSTEPS=4 times OVERSCAN=5). This
leads to separate integrations having been performed at 2064 different
wavelength PIXEL positions by the 512 DIODES. Your requested exposure
time is the time necessary for the 512 diodes to sample the 2064
pixels. Since the 2064 wavelength positions are not integrated
simultaneously, the actual exposure time received by each pixel
EXPOSURE is not the same as the allocated duration of the exposure,
EXPTIME.  Except for some pixels at each the end of the the array,
EXPOSURE is 1/NXSTEPS of EXPTIME.



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12. Miscellany

Q: What is Modified Julian Date?
A: HST uses this form of dating. Modified Julian Date 
	(MJD) = Julian Date - 2400000.5
MJD starts at midnight UT unlike the more common JD that starts at noon UT.

Q: How can I recognize a dead or noisy diode in my spectrum? 
A: This is explained in Chapter 32 of the Data Handbook version 3.

   Your "flakey" diode will typically be 20, OVERSCAN * NXSTEPS, pixels wide.

	First pixel affected = (N - 1) * NXSTEPS + 1
	Last pixel affected = (N - 1) * NXSTEPS + (NXSTEPS * OVERSCAN)	
	N = diode #, 1 to 512. OVERSCAN and NXSTEPS values can be found
	in the data header.

Beware: in IRAF diodes are numbered 1-512, but the FOS documentation
often labels them 0-511.

Q: What is a Y-base?
A: The unit of measure of Y position on the FOS photocathode. The
strength of the magnetic deflection of the Digicon tube is adjusted so
that 256 ybase steps equal the height of the FOS diodes.
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Copyright© 1998 The Association of Universities for Research in Astronomy, Inc. All Rights Reserved.